Skip to content

bbconf

Run pytests pypi-badge pypi-version Code style: black Github badge coverage

BEDbase project configuration package (agent)

What is this?

bbconf is a configuration and management tool for BEDbase, facilitating the reading of configuration files, setting up connections to PostgreSQL, PEPhub, S3, and Qdrant databases, managing file paths, and storing transformer models. It formalizes communication pathways for pipelines and downstream tools, ensuring seamless interaction."

Installation

To install bbconf use this command: 

pip install bbconf

or, install the latest version from the GitHub repository:

pip install git+https://github.com/databio/bbconf.git